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PhyloGenes 3.1

May 18, 2021. We are pleased to announce the PhyloGenes version 3.1 release. The gene families and gene trees are from the  PANTHER 16.0 release. In PhyloGenes only  genes from plant genomes and selected non-plant model organisms were included. Genes from other genomes in the PANTHER build have been removed (pruned). More stats

Experimental gene function annotations were extracted from the Gene Ontology Consortium (files created on 2021-04-01). Phylogenetic inferred gene function annotations were extracted from the GO PAINT project (files created on 2021-04-01).

External gene links were added:

- maizeGDB (for maize genes)

- SoyBase (for soybean genes)

- SGN (for tomato genes)

- GrainGenes (for wheat and barley genes)

- TAIR (for Arabidopsis genes)

More external links will be added over time.

PhyloGenes 3.0

February 11, 2021. We are pleased to announce the PhyloGenes version 3.0 release.  In this release the gene families and gene trees were updated from the  PANTHER 15.0 release to PANTHER 16.0 release. In PhyloGenes only  genes from plant genomes and selected non-plant model organisms were included. Genes from other genomes in the PANTHER build have been removed (pruned). More stats

Experimental gene function data was extracted from the Gene Ontology Consortium (files created on 2020-12-07). Phylogenetic inferred gene function data was extracted from the GO PAINT project (files created on 2021-01-04).

PhyloGenes 2.2

December 4, 2020. We are pleased to announce the PhyloGenes version 2.2 release.  The gene families and gene trees are from the  PANTHER 15.0 release. In PhyloGenes only  genes from plant genomes and selected non-plant model organisms were included. Genes from other genomes in the PANTHER build have been removed (pruned). More stats

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