Slides

Apollo Basics Training Slides (May 23 and 26, 2023)

Reading

• Apollo: Democratizing genome annotation
  • https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1006790

• Collaborative Annotation Redefines Gene Sets for Crucial Phytopathogens (see: 'Lessons Learnt for Future Collaborative Annotation Projects' section)
  • https://www.frontiersin.org/articles/10.3389/fmicb.2019.02477/full

• Application of a bioinformatics training delivery method for reaching dispersed and distant trainees

  • https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008715

• Double triage to identify poorly annotated genes in maize: The missing link in community curation

  • https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0224086
• Grapedia materials
  • https://integrape.eu/resources/data-management/how-to-manually-curate-genes/
• Maize materials
  • https://drive.google.com/drive/u/0/folders/19U84hdZm-wlQHhvCIWODGQOYy6jYOhlZ

• Apollo Help Docs (longer, keep link handy):

  • https://genomearchitect.readthedocs.io/en/latest/UsersGuide.html

Videos